BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B08SP1|AL425074
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1516 1864 0.0
>3x_Contig1516
Length = 8750
Score = 1864 bits (939), Expect = 0.0
Identities = 974/981 (99%), Gaps = 4/981 (0%)
Strand = Plus / Minus
Query: 1 gatcttgtaaacaccatggnacgttaccgaag-cactggcaatggagaagtttggagaga 59
||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 5148 gatcttgtaaacaccgtgg-acgttaccgaaggcactggcaatggagaagtttggagaga 5090
Query: 60 tcttggacaaagcttcgtggacagagaaaacagtttctggagtggtgtaaagtttgtcgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5089 tcttggacaaagcttcgtggacagagaaaacagtttctggagtggtgtaaagtttgtcgt 5030
Query: 120 tagaagtaccttcgttgttgacaccatcttcttcaccaccggtgataccgatttccattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5029 tagaagtaccttcgttgttgacaccatcttcttcaccaccggtgataccgatttccattt 4970
Query: 180 ccaaccattggtggatcttggccattctggtgaagtatttgacacatagaccaatgtttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4969 ccaaccattggtggatcttggccattctggtgaagtatttgacacatagaccaatgtttt 4910
Query: 240 cctcatcagtttcttcggacaaatccaacatgtgggaggagaacaatggttcaccgtgct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4909 cctcatcagtttcttcggacaaatccaacatgtgggaggagaacaatggttcaccgtgct 4850
Query: 300 tagcgaagtattcttcgtcagcctttagcataccatcgaaccatggtagcaacttcttag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4849 tagcgaagtattcttcgtcagcctttagcataccatcgaaccatggtagcaacttcttag 4790
Query: 360 cacaatgatcggtgtgtagaacaactgggataccgtaagctggagcaatggatctgatgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4789 cacaatgatcggtgtgtagaacaactgggataccgtaagctggagcaatggatctgatgt 4730
Query: 420 agtgagcagcagcgatagaacctctgatagaagcattttggccttcgttggaaacaccct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729 agtgagcagcagcgatagaacctctgatagaagcattttggccttcgttggaaacaccct 4670
Query: 480 taccagcaaagtaagcagcaccaccgttggaagtttgcaaaatgattggagatttgttgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4669 taccagcaaagtaagcagcaccaccgttggaagtttgcaaaatgattggagatttgttgt 4610
Query: 540 ctctagcagcttccaaagcagcaacaacagtggaagaagaggtcacgttgatagctggaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4609 ctctagcagcttccaaagcagcaacaacagtggaagaagaggtcacgttgatagctggaa 4550
Query: 600 tggcaaacttgtgttccttagcgtagtcgaacaaagccttgacatcgtcaccgacaatga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4549 tggcaaacttgtgttccttagcgtagtcgaacaaagccttgacatcgtcaccgacaatga 4490
Query: 660 caccggtctttctggtcaatacgtcttgagctggcattgtaatttcttttacgtgttgtg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4489 caccggtctttctggtcaatacgtcttgagctggcattgtaatttcttttacgtgttgtg 4430
Query: 720 ggttttttggtttaattcgtattaagtttaaattataaagtacttcaaaattaaggttta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4429 ggttttttggtttaattcgtattaagtttaaattataaagtacttcaaaattaaggttta 4370
Query: 780 atttttggtactattggttataagtcaaacgaaacttggattggtttttggatgatggtt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4369 atttttggtactattggttataagtcaaacgaaacttggattggtttttggatgatggtt 4310
Query: 840 ttgtatacacaagatataattgaatataaacaactactgatagatattaaaacgaattat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4309 ttgtatacacaagatataattgaatataaacaactactgatagatattaaaacgaattat 4250
Query: 900 caagatttkgggaagtatgcaattcattgttcttattatatatgaattgaatggrgg-aa 958
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 4249 caagattt-gggaagtatgcaattcattgttcttattatatatgaattgaatggaggaaa 4191
Query: 959 aattcacgaacaacttttttt 979
|||||||||||||| ||||||
Sbjct: 4190 aattcacgaacaacctttttt 4170
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8184
Number of Sequences: 1807
Number of extensions: 8184
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)